Terminologieserver Import-Tool

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This command line tool is helps to import Code Systems and Value Sets into the Terminology Server by using its web services.

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Usage

Parameter

Parameter Required Description Example
-h No Displays help -h
-f Yes Name of the file that is to be imported (e.g. CSV or LOINC) -f "C:\Temp\import.csv"
-f2 No Required for LOINC. Name of the file with the associations -f2 "C:\Temp\LOINC_MAP_TO.TXT"
-u Yes Login username registered at Terminology Server -u "username"
-p Yes The corresponding password -p "passwort"
-cs Yes Name of the new Code System. If the Name already exists, a new Version will be created. -cs "LOINC"
-csv Yes Name of the new Code System Version -csv "LOINC Released December 2011"
-format Yes Import format, possible values: CSV, CLAML, LOINC -format "LOINC"
-s No Hostname of the Server with port (e.g. http://193.25.22.68:8080), Default: http://127.0.0.1:8080 -s "http://www.term.mi.fh-dortmund.de:8080"

Example

java -jar TermserverImportTool.jar -u "username" -p "password" -f "C:\LOINCDB.TXT" -f2 "C:\LOINC_MAP_TO.TXT" -format "LOINC" -cs "LOINC" -csv "LOINC Released December 2011" -s "http://193.25.22.68:8080"

Possible Formats

CSV

The structure of the CSV File can be taken from web service documentation: WS-Beschreibung_-_Terminologieserver_Administration_ImportCodeSystem#Besonderheiten

Examples can be found below on the same page: WS-Beschreibung_-_Terminologieserver_Administration_ImportCodeSystem#Dateien

LOINC

LOINC consists of 2 files: LOINCDB.TXT and LOINC_MAP_TO.TXT

File names may be different in later Versions. The fist file contains all concepts, the second one all associations between them and both files are required for import.

The german LOINC can be downloaded from DIMDI: http://www.dimdi.de/dynamic/en/ehealth/loinc/downloads/loinc/

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